yusE [2019-09-04 10:36:34]

similar to thioredoxin

locus: BSU_32770

pI: 5.70

mw: 12.11 kDa

protein length: 106 aa

gene length: 321 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

Gene

Coordinates: 3,365,069 3,365,389

Phenotypes of a mutant

• defective in the the ability to support the growth of ''Synechococcus leopoliensis'' CCAP1405/1 on agar media [Pubmed|25875741]

The protein

Structure

• [PDB|2WZ9] (human thioredoxin domain, 26% identity)

Expression and Regulation

Operons

• genes: [gene|2122B0B9C3CB9488285ABDAEA451B45CD310268C|yusE]-[gene|8907351A05E7A2717AD6E743F0240FD94723425B|yusD]
  description: (according to [http://dbtbs.hgc.jp/COG/prom/yusED.html DBTBS]) null

  regulatory mechanism

  • [protein|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A]: activation, [Pubmed|14651647], in [regulon|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A regulon]

  regulation

  • expressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]

Biological materials

Mutant

• MGNA-B590 (yusE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1589 NBRP B. subtilis, Japan]
• BKE32770 ([gene|2122B0B9C3CB9488285ABDAEA451B45CD310268C|yusE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE32770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCGTGTTCTTGGAGTTCTT, downstream forward: _UP4_TGACATATTTCTCAGCATAT
• BKK32770 ([gene|2122B0B9C3CB9488285ABDAEA451B45CD310268C|yusE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK32770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCGTGTTCTTGGAGTTCTT, downstream forward: _UP4_TGACATATTTCTCAGCATAT

References

• 14651647,25875741